uk.ac.sanger.npg.bam.util
Class BamUtils

java.lang.Object
  uk.ac.sanger.npg.bam.util.BamUtils

public final class BamUtils
extends java.lang.Object

illumina2bam bam util class

Constructor Summary

BamUtils()

Method Summary

static java.lang.String	convertByteArrayToString(byte[] array)
static java.lang.String	convertPhredQualByteArrayToFastqString(byte[] array)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

BamUtils

public BamUtils()

Method Detail

convertPhredQualByteArrayToFastqString

public static java.lang.String convertPhredQualByteArrayToFastqString(byte[] array)

Parameters:

array -

Returns:

fastq quality string from phred qual byte array

convertByteArrayToString

public static java.lang.String convertByteArrayToString(byte[] array)

Parameters:

array -

Returns:

string from a byte array