Uses of Package
uk.ac.sanger.npg.picard

Packages that use uk.ac.sanger.npg.picard

uk.ac.sanger.npg.illumina
uk.ac.sanger.npg.picard

Classes in uk.ac.sanger.npg.picard used by uk.ac.sanger.npg.illumina

PicardCommandLine
This is the base class for any command line program class

Classes in uk.ac.sanger.npg.picard used by uk.ac.sanger.npg.picard

AlignmentFilterMetric.SQ
SQ record in SAM header

IndexDecoder.BarcodeMatch
BarcodeMatch class

IndexDecoder.BarcodeMetric
Metrics produced by the ExtractIlluminaBarcodes program that is used to parse data in the basecalls directory and determine to which barcode each read should be assigned.

IndexDecoder.NamedBarcode
Barcode Class

PicardCommandLine
This is the base class for any command line program class